The detailed information of tRNA gene sequence


Sequence ID>W1910912516
Genome IDNHPJ01000094
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorubrum halodurans Cb34 [NHPJ]
Start position on genome 42679
End posion on genome 42596
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcaactcgg
tRNA gene sequence 
GGTGGGGTGGCAGAGTGGCCCATTGCGCCGGTCTTGAAAACCGGTAGCCTCACGGCTTCC
TGGGTTCGAATCCCAGCCCCACCGtcc
Downstream region at tRNA end position 
gagtgcggca
Secondary structure (Cloverleaf model)
>W1910912516	Ser	TGA
                   g      Gtcc gagtgcggca
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       C T G G G     C
    G       + | | |                 T T
    C       T T G C
      C C A        G     TAGCCTCACGGCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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