The detailed information of tRNA gene sequence


Sequence ID>W1910912886
Genome IDNHPQ01000005
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPhycisphaerae bacterium SM-PulAB-D3 [NHPQ]
Start position on genome 8280
End posion on genome 8371
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaaaaaaaT
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCTGATGGTGCACCCTTGGAAAGGGTGTGTGCGGCTAACCGCC
GCACCGGGGGTTCGAATCCCCCTCTCTCCGTta
Downstream region at tRNA end position 
attgcagcgc
Secondary structure (Cloverleaf model)
>W1910912886	Ser	GGA
                   T      GTta attgcagcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    C       T G G T
      T G A        G     TGTGCGGCTAACCGCCGCACC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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