The detailed information of tRNA gene sequence


Sequence ID>C09110471
Genome IDCP001185
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho africanus TCF52B [CP001185]
Start position on genome 1729900
End posion on genome 1729810
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttacagaatt
tRNA gene sequence 
GGAGAGGTGGCCGAGGGGTCGAAGGCGCACGCCTGGAGAGCGTGTGACGCCCACAAGGCG
TCCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaaaaccggg
Secondary structure (Cloverleaf model)
>C09110471	Ser	GGA
                   t      GCCA gaaaaccggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      G G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGACGCCCACAAGGCGTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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