The detailed information of tRNA gene sequence


Sequence ID>C09110472
Genome IDCP001185
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho africanus TCF52B [CP001185]
Start position on genome 1707799
End posion on genome 1707709
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatagcttgt
tRNA gene sequence 
GGAGGCGTGTTCCGAACTGGCTAAGGGGCCGGTCTTGAAAACCGGTGGGGGTTACACCCC
CGTGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
aatatgaaat
Secondary structure (Cloverleaf model)
>C09110472	Ser	TGA
                   t      GCCA aatatgaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
    C A A G        G      | | | | |     G
  T         C C T T       G T G G G     C
  G           | + +                 T T
  G         A G G G
    C T A          G     TGGGGGTTACACCCCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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