The detailed information of tRNA gene sequence


Sequence ID>C09110715
Genome IDCP001275
Search identical group
Phylum/ClassThermomicrobiota
SpeciesThermomicrobium roseum DSM 5159 [CP001275]
Start position on genome 604048
End posion on genome 603959
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatcgcgcac
tRNA gene sequence 
GGAAGGGTCGCATAGTGGCCGAGTGCGCACGGCTGGAAACCGTGTGGGGGCGCAAGCCCC
TCGTGGGTTCGAATCCCACCCCTTCCGCCG
Downstream region at tRNA end position 
aacgtcagtc
Secondary structure (Cloverleaf model)
>C09110715	Ser	GGA
                   c      GCCG aacgtcagtc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C G A        G     TGGGGGCGCAAGCCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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