The detailed information of tRNA gene sequence


Sequence ID>C09111137
Genome IDCP001636
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [CP001636]
Start position on genome 891744
End posion on genome 891656
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggacaccatt
tRNA gene sequence 
GGAGCATTGGCCGAGAGGTCCAAGGCAGCGGCTTGCTAAGCCGTGGCCGCGCAAGCGGCT
CGTTCGTTCGAATCGAACATGCTCCGCCA
Downstream region at tRNA end position 
gtttcttcac
Secondary structure (Cloverleaf model)
>C09111137	Ser	GCT
                   t      GCCA gtttcttcac
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     C A A G C     A
      A G A        G      | | | | |     G
    G       G C C G       G T T C G     C
    G         | | |                 T T
    T       A G G C
      C C A        A     GGCCGCGCAAGCGGCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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