The detailed information of tRNA gene sequence


Sequence ID>C09111132
Genome IDCP001636
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [CP001636]
Start position on genome 892323
End posion on genome 892247
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
acaaagtttc
tRNA gene sequence 
GTCCGCATAGCTCAGCTGGTAGCAGCGCTCGCCTTGTAAGCGAGAGGTGGTCCGTTCGAT
TCGGACTGCGGGCTCCA
Downstream region at tRNA end position 
ttcgcagatt
Secondary structure (Cloverleaf model)
>C09111132	Thr	TGT
                   c      TCCA ttcgcagatt
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T          T T
                    T     C A G G C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C C G     C
    G         | | |                 T T
    G       C A G C
      T A G        G     AGGTG
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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