The detailed information of tRNA gene sequence


Sequence ID>C09100752
Genome IDFM178379
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAliivibrio salmonicida LFI1238 [FM178379, FM178380]
Start position on genome 3225685
End posion on genome 3225761
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cacgcataac
tRNA gene sequence 
AGGGGTGTAGCTCCAACTGGCAGAGCAGCGGATTCCAAATCCGCGTGTTGGGAGTTCGAA
TCTCTCCACCCCTGCCA
Downstream region at tRNA end position 
tatttagaga
Secondary structure (Cloverleaf model)
>C09100752	Trp	CCA
                   c      GCCA tatttagaga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      A A C        A      | + | | |     G
    C       C T C G       G G G A G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GTGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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