The detailed information of tRNA gene sequence


Sequence ID>C09103727
Genome IDCP001087
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulforapulum autotrophicum HRM2 [CP001087]
Start position on genome 4090864
End posion on genome 4090788
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agtttgatgc
tRNA gene sequence 
AGGTCAGTAGCTCTAATTGGTAGAGCGCCGGACTCCAAATCCGGATGCTGGGGGTTCGAC
TCCCTCCTGACCTGCCA
Downstream region at tRNA end position 
tcatttttta
Secondary structure (Cloverleaf model)
>C09103727	Trp	CCA
                   c      GCCA tcatttttta
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T C
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ATGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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