The detailed information of tRNA gene sequence


Sequence ID>C09103920
Genome IDCP001114
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus deserti VCD115 [CP001114]
Start position on genome 200196
End posion on genome 200121
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cacagtccca
tRNA gene sequence 
GGGTCCTTAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGTAGGTCGTAGGTTCAAGT
CCTGCAGGGCCCGCCA
Downstream region at tRNA end position 
aaaaatcccc
Secondary structure (Cloverleaf model)
>C09103920	Trp	CCA
                   a      GCCA aaaaatcccc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C G T C C     A
      T G A        A      | + | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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