The detailed information of tRNA gene sequence


Sequence ID>C09108107
Genome IDCP001431
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNeorickettsia risticii str. Illinois [CP001431]
Start position on genome 623090
End posion on genome 623016
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttgaatctT
tRNA gene sequence 
AGGAGCGTAGCTCAATTGGTAGAGTTTCGGTCTCCAAAACCGATGGTTGTAGGTTCGAGT
CCTATCGCTCCTGTtc
Downstream region at tRNA end position 
ttgtatgtat
Secondary structure (Cloverleaf model)
>C09108107	Trp	CCA
                   T      GTtc ttgtatgtat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     T A T C C     A
      T A A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | +                 T T
    G       G A G T
      T A          T     TGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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