The detailed information of tRNA gene sequence


Sequence ID>C09108131
Genome IDCP001196
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfipia carboxidovorans OM5 OM5; ATCC 49405 [CP001196]
Start position on genome 1594542
End posion on genome 1594617
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acccgcctgt
tRNA gene sequence 
AGGGGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCGGGTTCGAGC
CCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
gtttccgttt
Secondary structure (Cloverleaf model)
>C09108131	Trp	CCA
                   t      GCCA gtttccgttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          C G
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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