The detailed information of tRNA gene sequence


Sequence ID>C09111131
Genome IDCP001636
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [CP001636]
Start position on genome 892424
End posion on genome 892349
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccagcttctt
tRNA gene sequence 
GAGTGCCTAGTTCAACTGGCAGAACACCGGTCTCCAAAACCGGCGGTTGAAGGTTCGACT
CCTTCGGTGCTCGCCA
Downstream region at tRNA end position 
tttctcgtag
Secondary structure (Cloverleaf model)
>C09111131	Trp	CCA
                   t      GCCA tttctcgtag
                     G - C
                     A - T
                     G - C
                     T + G
                     G + T
                     C - G
                     C - G          T C
                    T     C T T C C     A
      C A A        A      | | | | |     G
    T       C T T G       G A A G G     C
    G       | | | |                 T T
    G       G A A C
      C A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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