The detailed information of tRNA gene sequence


Sequence ID>W1911021841
Genome IDNLPH01000006
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli MOD1-EC5446 [NLPH]
Start position on genome 46705
End posion on genome 46614
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agaggcgtgt
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCAAGGGAGTATGCGGTCAAAAGCTG
CATCCGGGGTTCGAATCCCCGCCTCACCGCCA
Downstream region at tRNA end position 
tttcatccgt
Secondary structure (Cloverleaf model)
>W1911021841	Cys	GCA
                   t      GCCA tttcatccgt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     ATGCGGTCAAAAGCTGCATC
                    C   T
                    T + G
                    C   A
                    C - G
                    C - G
                  C       G
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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