The detailed information of tRNA gene sequence


Sequence ID>W1911075140
Genome IDNMUF01000015
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum aerophilum YKB32 [NMUF]
Start position on genome 36260
End posion on genome 36172
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taggactaac
tRNA gene sequence 
GGGGCCGTAGTCTAGCCTGGTAGGATGCGTGGCTTGGGACCGCGAGGCAAGAGCCCACGT
GATCCCGGGTTCAAATCCCGGCGGCCCCAtct
Downstream region at tRNA end position 
acattttatt
Secondary structure (Cloverleaf model)
>W1911075140	Pro	TGG
                   c      Atct acattttatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        G     AGGCAAGAGCCCACGTGATC
                    C - G
                    G - C
                    T + G
                    G - C
                    G - C
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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