The detailed information of tRNA gene sequence


Sequence ID>W1911075154
Genome IDNMUF01000071
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum aerophilum YKB32 [NMUF]
Start position on genome 674
End posion on genome 760
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgaaaattt
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGCCCAAGGCGCGGGACTCGAGATCCCGTCCCCGTCCAGGGGGC
GTGGGTTCAAATCCCACCCCCGGCGCCt
Downstream region at tRNA end position 
ttcccctttt
Secondary structure (Cloverleaf model)
>W1911075154	Ser	CGA
                   t      GCCt ttcccctttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TCCCCGTCCAGGGGGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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