The detailed information of tRNA gene sequence


Sequence ID>C09107460
Genome IDCP001298
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylorubrum extorquens CM4 [CP001298]
Start position on genome 308301
End posion on genome 308227
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgggtgttt
tRNA gene sequence 
GGGTGCGTAGCTCAGCGGGAGAGCATTCGCTTCACACGCGAAGGGTCACAGGTTCGATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position 
ccgcccctcc
Secondary structure (Cloverleaf model)
>C09107460	Val	CAC
                   t      ACCA ccgcccctcc
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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