The detailed information of tRNA gene sequence


Sequence ID>C09102621
Genome IDCP001226
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola Dsem [CP001226]
Start position on genome 98081
End posion on genome 98155
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtgggctgc
tRNA gene sequence 
TATGGGGTGGAGTAGAGGCATCTCATTAGGCTCATGACCTAAAGGTCGCAGGTTCGACTC
CTGCCCCCGTTGCCG
Downstream region at tRNA end position 
tcttgcgccc
Secondary structure (Cloverleaf model)
>C09102621	Met	CAT
                   c      GCCG tcttgcgccc
                     T   T
                     A - T
                     T + G
                     G - C
                     G - C
                     G - C
                     G - C          T C
                    T     C G T C C     A
        G A        G      | | | | |     G
      A     T G A G       G C A G G     C
      G       | | |                 T T
      G     T C T C
        C A        A     AGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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