The detailed information of tRNA gene sequence


Sequence ID>C09102626
Genome IDCP001226
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola Dsem [CP001226]
Start position on genome 70767
End posion on genome 70693
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaccaagca
tRNA gene sequence 
AGACTTATAGCTTAAAGGCAGAGCGGGTGGCTCATGACCATTACGGCGAGGGTTCGAGCC
CCTCTAAGTCTACAA
Downstream region at tRNA end position 
gccagctagc
Secondary structure (Cloverleaf model)
>C09102626	Met	CAT
                   a      ACAA gccagctagc
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A
                     T - A
                     A - T          C G
                    T     C T C C C     A
        A A        A      | | | | |     G
      A     T T C G       G A G G G     C
      G     + | | |                 T T
      G     G A G C
        C A        G     ACGGC
                    G + T
                    G + T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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