The detailed information of tRNA gene sequence


Sequence ID>W1911143644
Genome IDNPBC01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAfifella marina DSM 2698 [NPBC]
Start position on genome 187723
End posion on genome 187647
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcgcgcgcgt
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGCGCAAGAGGTCGTGGGTTCGAA
TCCCGCCGCTCCGACCA
Downstream region at tRNA end position 
ttccccactg
Secondary structure (Cloverleaf model)
>W1911143644	Pro	GGG
                   t      ACCA ttccccactg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       C
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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