The detailed information of tRNA gene sequence


Sequence ID>C09103907
Genome IDCP001114
Search identical group
Phylum/ClassDeinococcota
SpeciesDeinococcus deserti VCD115 [CP001114]
Start position on genome 2108598
End posion on genome 2108523
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcttctggca
tRNA gene sequence 
GGGCTCTTAGCTCAACGGTCAGAGCAGTCGGCTCATAACCGATTGGTTGCCGGTTCAAAT
CCGGCAGGGCCCACCA
Downstream region at tRNA end position 
acatccgggc
Secondary structure (Cloverleaf model)
>C09103907	Met	CAT
                   a      ACCA acatccgggc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T A
                    T     C G G C C     A
      C A A        A      | | | | |     A
    G       C T C G       G C C G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTT
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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