The detailed information of tRNA gene sequence


Sequence ID>C09106554
Genome IDCP001678
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHirschia baltica ATCC 49814 [CP001678]
Start position on genome 2349319
End posion on genome 2349243
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttcaaaatt
tRNA gene sequence 
GGTCAGGTAGCTCAGCTGGTTAGAGCGCAGGACTCATAATCCTGAGGTCGAGAGTTCAAG
TCTCTCTCTGACCACCA
Downstream region at tRNA end position 
atttttctta
Secondary structure (Cloverleaf model)
>C09106554	Met	CAT
                   t      ACCA atttttctta
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     G + T          T G
                    T     C T C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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