The detailed information of tRNA gene sequence


Sequence ID>C09106600
Genome IDCP001098
Search identical group
Phylum/ClassBacillota
SpeciesHalothermothrix orenii H 168 H 168; DSM 9562 [CP001098]
Start position on genome 1201238
End posion on genome 1201314
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaccaatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGGCGGTTCGAA
TCCGTCCCCCGCAACCA
Downstream region at tRNA end position 
tttatggtga
Secondary structure (Cloverleaf model)
>C09106600	Met	CAT
                   t      ACCA tttatggtga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      T G A        G      | + | | |     G
    C       C G A G       G G C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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