The detailed information of tRNA gene sequence


Sequence ID>C09108088
Genome IDCP001431
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNeorickettsia risticii str. Illinois [CP001431]
Start position on genome 225672
End posion on genome 225747
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gatctcacaT
tRNA gene sequence 
GGCGATGTAGCTCAGCTGGTTAGAGCGGCGGAATCATAATCCGTAGGTCGTGGGTTCGAG
TCCCACTTTCGCTATtt
Downstream region at tRNA end position 
ccttctttat
Secondary structure (Cloverleaf model)
>C09108088	Met	CAT
                   T      ATtt ccttctttat
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     T   T
                     G + T          T G
                    T     C A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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