The detailed information of tRNA gene sequence


Sequence ID>C09111134
Genome IDCP001636
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [CP001636]
Start position on genome 892130
End posion on genome 892052
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catcacacac
tRNA gene sequence 
TGCGCGGTAGGGGAGCCTGGCCGTCCCCGCGAGTTTCATACGCTCGAGATCGCAAGTTCA
AATCTTGCTCGCGCAACCA
Downstream region at tRNA end position 
tcgctttctg
Secondary structure (Cloverleaf model)
>C09111134	Met	CAT
                   c      ACCA tcgctttctg
                     T - A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     C G T T C     A
    C C G A        A      | | | | |     A
  T         G G G G       G C A A G     C
  G         | | | |                 T T
  G         C C C C
    C C G T        G     AGATC
                    C - G
                    G - C
                    A - T
                    G - C
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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