The detailed information of tRNA gene sequence


Sequence ID>CHL090100259
Genome IDAF022186
Search identical group
Phylum/ClassRhodophyta
SpeciesCyanidium caldarium
Start position on genome 109484
End posion on genome 109401
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatgttgcaa
tRNA gene sequence 
GCATCTATGGCCGAGTGGCTTAAGGCAGCGGACTCATAATCCGTCGACATAATGTCATCG
CTGGTTCAAATCCGGCTAGATGCAaag
Downstream region at tRNA end position 
tttaataacc
Secondary structure (Cloverleaf model)
>CHL090100259	Met	CAT
                   a      Aaag tttaataacc
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T - A
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | + | |     A
    G       G C C G       G C T G G     C
    G         | | |                 T T
    C       A G G C
      T T A        A     CGACATAATGTCATC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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