The detailed information of tRNA gene sequence


Sequence ID>W1911238423
Genome IDNSCN01000004
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPhotorhabdus sp. HUG-39 [NSCN]
Start position on genome 225748
End posion on genome 225654
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
gtatttatat
tRNA gene sequence 
GGAAGATCATCGTCCCCGGTGGGGCGGCTGGACTTCAAATCCAGATGGGGCCGCCAGCGG
TCTCTGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
attagccttc
Secondary structure (Cloverleaf model)
>W1911238423	Sec	TCA
                   t      GCCA attagccttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    A     T G T C C     A
      C C C        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     ATGGGGCCGCCAGCGGTCTCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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