The detailed information of tRNA gene sequence


Sequence ID>W1911238599
Genome IDNSCX01000011
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis VBD2 [NSCX]
Start position on genome 229
End posion on genome 155
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tccaagattt
tRNA gene sequence 
GCCCATGTGGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCACGCGTTCGATCC
GCGTCATGGGCACCA
Downstream region at tRNA end position 
tcgaattcta
Secondary structure (Cloverleaf model)
>W1911238599	Thr	GGT
                   t      ACCA tcgaattcta
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          C T
                    T     T G C G C     A
        G A        G      | | | | |     G
      T     C T C G       A C G C G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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