The detailed information of tRNA gene sequence


Sequence ID>W1911245428
Genome IDNSKB01000002
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas salipaludis WRN001 [NSKB]
Start position on genome 111522
End posion on genome 111435
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccacaatgt
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTCGAAGGAGCACGCCTGGAAAGTGTGTAAGTCGAAAGGCTTC
GAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
caaatatcga
Secondary structure (Cloverleaf model)
>W1911245428	Ser	GGA
                   t      GCCA caaatatcga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TAAGTCGAAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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