The detailed information of tRNA gene sequence


Sequence ID>CHL090100590
Genome IDAJ879453
Search identical group
Phylum/ClassViridiplantae
SpeciesAcorus calamus
Start position on genome 28086
End posion on genome 28156
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtattgtttt
tRNA gene sequence 
GGCGGCATGGCCGAGTGGTAAGGCGGGGGACTGCAAATCCTTTTTCCCCAGTTCAAATCC
GGGTGTCGCCTgat
Downstream region at tRNA end position 
caaaaaatac
Secondary structure (Cloverleaf model)
>CHL090100590	Cys	GCA
                   t      Tgat caaaaaatac
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        G      | | |   |     A
      T     G C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TTTC
                    G + T
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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