The detailed information of tRNA gene sequence


Sequence ID>CHL090100595
Genome IDAJ879453
Search identical group
Phylum/ClassViridiplantae
SpeciesAcorus calamus
Start position on genome 53761
End posion on genome 53835
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgataaatT
tRNA gene sequence 
ACCTACTTAACCCAGTGGTTAGAGTATTGCTTTCATACGGCGGGAGTCATTGGTTCAAAT
CCAATAGTAGGTAGaa
Downstream region at tRNA end position 
aaatttatta
Secondary structure (Cloverleaf model)
>CHL090100595	Met	CAT
                   T      AGaa aaatttatta
                     A - T
                     C - G
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A          T A
                    T     T A A C C     A
      T G A        A      | | | | |     A
    G       C C C A       A T T G G     C
    G       |   | |                 T T
    T       G A G T
      T A          A     GAGTC
                    T + G
                    T + G
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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