The detailed information of tRNA gene sequence


Sequence ID>CHL090101118
Genome IDAP009368
Search identical group
Phylum/ClassViridiplantae
SpeciesOlimarabidopsis pumila
Start position on genome 7831
End posion on genome 7744
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttcgatta
tRNA gene sequence 
GGAGAGATGGCTGAGTGGACTAAAGCGTTGGATTGCTAATCCATTGTACGAGTTAATCGT
ACCGAGGGTTCGAATCCCTCTCTTTCCCttt
Downstream region at tRNA end position 
ctgatggtgt
Secondary structure (Cloverleaf model)
>CHL090101118	Ser	GCT
                   a      Cttt ctgatggtgt
                     G - C
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    A       A A G C
      C T A        G     TGTACGAGTTAATCGTACC
                    T   T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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