The detailed information of tRNA gene sequence


Sequence ID>CHL090101438
Genome IDAY286123
Search identical group
Phylum/ClassRhodophyta
SpeciesCyanidioschyzon merolae strain DBV201
Start position on genome 129986
End posion on genome 130078
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacaactaag
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCAACAGATTGCTAATCTGTCGTATGGGCCAAATTC
CCATACCAAGGGTTCGAATCCCTTTCTCTCCTCtt
Downstream region at tRNA end position 
tgggactgta
Secondary structure (Cloverleaf model)
>CHL090101438	Ser	GCT
                   g      TCtt tgggactgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTATGGGCCAAATTCCCATACC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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