The detailed information of tRNA gene sequence


Sequence ID>W1911491715
Genome IDOAOI01000046
Search identical group
Phylum/ClassBacillota
SpeciesClostridium thiosulfatireducens [OAOI]
Start position on genome 181
End posion on genome 85
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
gaagtaatat
tRNA gene sequence 
GGGAGTAGATAGGTGCTGGTGTGCCTGCCGGTCTTCAAAACCGAGTTGCCGTGCTAAGAC
CACGACGGGTGAGTTCGATTCTCACATATTCCCGCCA
Downstream region at tRNA end position 
aaaaaacaat
Secondary structure (Cloverleaf model)
>W1911491715	Sec	TCA
                   t      GCCA aaaaaacaat
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     A - T
                     G   A          T T
                    A     C A C T C     A
      T C G        T      | | | | |     G
    G       T G G A       G T G A G     C
    G       + | | |                 T T
    T       G C C T
      G T          G     GTTGCCGTGCTAAGACCACGACGG
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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