The detailed information of tRNA gene sequence


Sequence ID>W1911493093
Genome IDOBEI01000001
Search identical group
Phylum/ClassAquificota
SpeciesPersephonella hydrogeniphila DSM 15103 [OBEI]
Start position on genome 16517
End posion on genome 16607
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcctgaaac
tRNA gene sequence 
GGATGGGTGCCCGAGCGGCCGAAGGGGCAGCACTGGAAATGCTGTGTACCGTTTATCGGT
ACCGTGGGTTCAAATCCCACCCCATCCGCCA
Downstream region at tRNA end position 
tgagagttta
Secondary structure (Cloverleaf model)
>W1911493093	Ser	GGA
                   c      GCCA tgagagttta
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TGTACCGTTTATCGGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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