The detailed information of tRNA gene sequence


Sequence ID>W1911493128
Genome IDOBEI01000017
Search identical group
Phylum/ClassAquificota
SpeciesPersephonella hydrogeniphila DSM 15103 [OBEI]
Start position on genome 3297
End posion on genome 3223
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
catagaggaT
tRNA gene sequence 
GGGGACGTAGCTCAGCTGGGAGAGCATCTGCTTTGCACGCAGAAGGTCAGGGGTTCGAAT
CCCCTCGTCTCCATaa
Downstream region at tRNA end position 
gagaggaaga
Secondary structure (Cloverleaf model)
>W1911493128	Ala	TGC
                   T      ATaa gagaggaaga
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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