The detailed information of tRNA gene sequence


Sequence ID>W1911493350
Genome IDOBEN01000002
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobacter hydrogenophilus DSM 2913 [OBEN]
Start position on genome 100802
End posion on genome 100889
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attaatatca
tRNA gene sequence 
GGCGAGGTGCCGGAGTGGACGAACGGGGCGGTCTCGAAAATCGCTGTGGGTTCAAAGCCC
ACCGGGGGTTCGAATCCCTCCCTCGCCGtaa
Downstream region at tRNA end position 
gggaagaaga
Secondary structure (Cloverleaf model)
>W1911493350	Ser	CGA
                   a      Gtaa gggaagaaga
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    A       A C G G
      C G A        G     TGTGGGTTCAAAGCCCACC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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