The detailed information of tRNA gene sequence


Sequence ID>W1911493354
Genome IDOBEN01000002
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobacter hydrogenophilus DSM 2913 [OBEN]
Start position on genome 83469
End posion on genome 83380
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
actaccctta
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGCAGCACTGGAAATGCTGTGTACGGGTAATCCCC
GTACCGCGGGTTCGAATCCCGCCCTCTCCGttt
Downstream region at tRNA end position 
aatccgtttc
Secondary structure (Cloverleaf model)
>W1911493354	Ser	GGA
                   a      Gttt aatccgtttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTACGGGTAATCCCCGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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