The detailed information of tRNA gene sequence


Sequence ID>W1911493357
Genome IDOBEN01000003
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobacter hydrogenophilus DSM 2913 [OBEN]
Start position on genome 72825
End posion on genome 72738
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaattatta
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGACGAAGGCGGGTGATTTGAAATCACCAGTGGGTTCACAGCCC
ACCGGGGGTTCGAATCCCTCCCCCTCCGtgt
Downstream region at tRNA end position 
aatattacgc
Secondary structure (Cloverleaf model)
>W1911493357	Ser	TGA
                   a      Gtgt aatattacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     AGTGGGTTCACAGCCCACC
                    G - C
                    G - C
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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