The detailed information of tRNA gene sequence


Sequence ID>W1911493358
Genome IDOBEN01000003
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobacter hydrogenophilus DSM 2913 [OBEN]
Start position on genome 36823
End posion on genome 36724
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
ccaaaaggta
tRNA gene sequence 
GGGAGAGTGTGGCTGGCTGGTGCCGCCCCGGGACTTCAAATCCCGTGGGGGGTCGCTGGA
TGCGGTCCCCGGAGGGTTCGATTCCCTTACTCTCCCGCCA
Downstream region at tRNA end position 
aaagatgaca
Secondary structure (Cloverleaf model)
>W1911493358	Sec	TCA
                   a      GCCA aaagatgaca
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    G     T T C C C     A
      C G G        T      + | | | |     G
    T       T C G G       G A G G G     C
    G         | | |                 T T
    G       C G C C
      T G C        C     TGGGGGGTCGCTGGATGCGGTCCCCG
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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