The detailed information of tRNA gene sequence


Sequence ID>W1911493877
Genome IDOBJN01000007
Search identical group
Phylum/ClassBacillota
SpeciesClostridium paraputrificum LH025 [OBJN]
Start position on genome 5218
End posion on genome 5308
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcgtgatat
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTACCTTCACGGGT
ACCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
caaaaaaact
Secondary structure (Cloverleaf model)
>W1911493877	Ser	TGA
                   t      GCCA caaaaaaact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       C A G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTACCTTCACGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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