The detailed information of tRNA gene sequence


Sequence ID>W1911502833
Genome IDOEQB01000003
Search identical group
Phylum/ClassBacillota
SpeciesMegasphaera vaginalis (ex Bordigoni et al. 2020) Marseille-P4857 [OEQB]
Start position on genome 40439
End posion on genome 40363
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cctcgtcttt
tRNA gene sequence 
GACTCAGTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCTAGGGTTCGAA
TCCCTACTGGGTCACCA
Downstream region at tRNA end position 
tcagcataca
Secondary structure (Cloverleaf model)
>W1911502833	Arg	TCT
                   t      ACCA tcagcataca
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     A - T
                     G - C          T A
                    T     A T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       T A G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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