The detailed information of tRNA gene sequence


Sequence ID>W1911502845
Genome IDOEQB01000008
Search identical group
Phylum/ClassBacillota
SpeciesMegasphaera vaginalis (ex Bordigoni et al. 2020) Marseille-P4857 [OEQB]
Start position on genome 83387
End posion on genome 83463
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaatggaaac
tRNA gene sequence 
GGCCCCGTGGTGTAGCGGTTTAACATGTCGCCCTGTCACGGCGAAGATCGTCAGTTCAAA
TCTGATCGGGGTCGCCA
Downstream region at tRNA end position 
ttttgctcag
Secondary structure (Cloverleaf model)
>W1911502845	Asp	GTC
                   c      GCCA ttttgctcag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A G T C     A
      C G A        G      + | | | |     A
    G       T G T G       G T C A G     C
    G       | | | +                 T T
    T       A C A T
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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