The detailed information of tRNA gene sequence


Sequence ID>W1911502848
Genome IDOEQB01000008
Search identical group
Phylum/ClassBacillota
SpeciesMegasphaera vaginalis (ex Bordigoni et al. 2020) Marseille-P4857 [OEQB]
Start position on genome 83630
End posion on genome 83703
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tccatagtat
tRNA gene sequence 
GGCGGCATAGCCAAGCGGTAAGGCAGAGGTCTGCAAAACCTTCATCCCCAGTTCGATTCT
GGGTGCCGCCTCCA
Downstream region at tRNA end position 
tagtttttct
Secondary structure (Cloverleaf model)
>W1911502848	Cys	GCA
                   t      TCCA tagtttttct
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     G G G T C     A
        G A        A      | | | | |     G
      C     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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