The detailed information of tRNA gene sequence


Sequence ID>W1911539325
Genome IDOMPS01000046
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRuegeria sp. EL01 [OMPS]
Start position on genome 236188
End posion on genome 236277
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcgcctccac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ttacccacac
Secondary structure (Cloverleaf model)
>W1911539325	Ser	GGA
                   c      GCCA ttacccacac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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