The detailed information of tRNA gene sequence


Sequence ID>CHL090200127
Genome IDEF067921
Search identical group
Phylum/Classstramenopiles
SpeciesThalassiosira pseudonana
Start position on genome 85682
End posion on genome 85607
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
aatatagttT
tRNA gene sequence 
GGGCTTGTAGCTCAGTGGACTAGAGCACGTGGCTACGAACTACGGTGTCAGGGGTTCGAA
TCCCTTCTTGCCCAAta
Downstream region at tRNA end position 
tatcgttcta
Secondary structure (Cloverleaf model)
>CHL090200127	Arg	ACG
                   T      AAta tatcgttcta
                     G - C
                     G - C
                     G - C
                     C - G
                     T   T
                     T   T
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       A G G G G     C
    G       | | | |                 T T
    A       G A G C
      C T A        A     GTGTC
                    C - G
                    G - C
                    T - A
                    G + T
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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