The detailed information of tRNA gene sequence


Sequence ID>CHL090800005
Genome IDAB086179
Search identical group
Phylum/ClassViridiplantae
SpeciesAnthoceros formosae
Start position on genome 65051
End posion on genome 65696
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gtgagaaaga
tRNA gene sequence 
GGGGGTATGGCGGAATAGGTAGACGCTGCGGACTTAAAATCCGTTGGCTTTACAGACCGT
GAGGGTTCAAGTCCCTCTACCCCCaaaa
Downstream region at tRNA end position 
agtaatttac
Secondary structure (Cloverleaf model)
>CHL090800005	Leu	TAA
                   a      aaaa agtaatttac
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    A       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGGCTTTACAGACCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=561 (in A-loop)
AATTAAATTGAGCCTCAGTGGGGAAACTCACTAAGTGGTAGTTTTCAGATTCAGGTAAACCTAGGTTGGT
TGAAGAGGGAAGGAAGGTAATCCCGGGCCAAATTTTACTTAAAACAAACCAAACTCGCGTATTTTTTTTC
TTTTTTATTTTCATAAAATTAGGAAAAAAGGAAAAAGGAAGTGAGGAAATGGGGTTAAATAGGTGTGGGG
ACTCAATGGAAGCTATCCTAACTTCATTTTTTTCCAAAATATTCTAAAAAATTTATCTATAATATATTTT
TATTTTTTTCTATCGTGAGGTACGACTTATAGAATAAAATGAAATTTTTATACTTTATTTATTTTTAAAA
AGGATATAAAAAAAAAATACTTAGGCTATTTTTTAACCTTAAAAAACTTCAATAAATACACTAGAGTTTT
TTCTAGAAGAAGAATTATTTAATTAATACAATTTACTAATAATAATTGATTGAGGGTGAGGAATAACTAG
ATAGACGAGGATAAAGATAGAGTCCATTTCCACATGTTCCTTTTGGCAGCAATGTAAATTGTAGTGGGAA
G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK