The detailed information of tRNA gene sequence


Sequence ID>CHL090800095
Genome IDAY178864
Search identical group
Phylum/ClassViridiplantae
SpeciesAdiantum capillus-veneris
Start position on genome 44774
End posion on genome 45437
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcctaaaggT
tRNA gene sequence 
GGGGATATGGCGAAATGGTAGACGCAGCGGACTCAAAATCCGTTGGCTTTGGCCGTGAGG
GTTCGATTCCCTCTATCCCCAGag
Downstream region at tRNA end position 
tgaaacgtat
Secondary structure (Cloverleaf model)
>CHL090800095	Leu	CAA
                   T      AGag tgaaacgtat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     C T C C C     A
      T A A        G      | | | | |     G
    G       A G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          A     TGGCTTTGGCCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C*A A
intron: position=35, length=580 (in A-loop)
AATCGGATTGAGCCTAGGTATGGAAACGTATCAAGTGGCAACTCCCAGATTCAGGGAAACCTGGGATTAT
TCAGCAGGCAATCCTGAGCCAAATCCCGTTCCACGTTGTGGAGTAGTGATCAGATCGCTAAAAAAGCGGG
ATAGGTACAGAGACTCGAAGGGGGTTATTCTAGCGGGCGAACTATTAATAACTAGTTTTCAAATATTGAA
ATGTTCGATGTGGTTGGCCGCATGAGGTAAAGCAGATAGAAAGATTGAAGTGGAGTTGGGAAAAAGGATT
TCAGTCTTCGGAAGCAAGCTCATTTTAATGAGCTTAAAAAAAGCAGTCATACGCGGAATCGGGCCAATAT
TCAGTCTCAAAAGCACTAAGTATACCTACTATCTCATATTGGTGCCGCCAGTTCTGACATCTCCCCCCCC
ACCCGTCCTACCTAAGATCTCATCACATTTCTACGACTACTCTTCCCCCCTCAACGGATGAACCGGCAAC
AAATCTAATTTTTTTTTTCGCGAATAAAGGTAGAGCCCCATTCTACAAAGTTACCTATAATATAGGAGTG
ACGCAAGTTGCAGTAGAAGG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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