The detailed information of tRNA gene sequence


Sequence ID>CHL090800129
Genome IDAY780259
Search identical group
Phylum/ClassViridiplantae
SpeciesEucalyptus globulus subsp. Globulus
Start position on genome 51450
End posion on genome 52040
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
taaaaaaaag
tRNA gene sequence 
GGGGATATGGCGAAATTGGTAGACGCTACGGACTTAAAATCCGTCGACTTTAAAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCaaaa
Downstream region at tRNA end position 
aggaccattt
Secondary structure (Cloverleaf model)
>CHL090800129	Leu	TAA
                   g      aaaa aggaccattt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     CGACTTTAAAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=506 (in A-loop)
AATTGGATTGAGCCTTGGTATGGAAACCTACTAAGTGACAACTTTCAAATTCAGAGAAACCCTGGAACTA
AAGATGGGCAATCCTGAGCCAAATCCTGTTTTACGAAAACCAACAAAACAATAAGGGTTCATAAAGCGAG
AATAAAAAAAGGATAGGTGCAGAGACTCAATGGGAGCTGTTCTAACAAATGGAGTTGACCACGTTGCGTT
GGTAAAGGAATCTTTTTCTCGAACCTCGAGAAAGGGAAAGGATAAACCTATGTATATACGTATACGTACT
GAATACTATCTCAAATGATTAATGACGACGCGAATTTTTTATATGAAAAAGGAAAGAATTGTTGTGAATC
AATTCTAAGTTGAAGAAAGAATCGAATATTCATTGATTAAATCATTTACTCCGTGGTCTGATAAATCTTT
TGAAGAACTGATTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACAACAATGA
AATTTAGAGTAAGAGG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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