The detailed information of tRNA gene sequence


Sequence ID>CHL090800198
Genome IDDQ422812
Search identical group
Phylum/ClassViridiplantae
SpeciesChlorokybus atmophyticus
Start position on genome 33028
End posion on genome 32711
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tggatcaatT
tRNA gene sequence 
GGGGATATGGCGGAATTGGTAGACGCTGCGGACTTAAAATCCGTTGGTTCTAATAAAACC
GTAAGGGTTCAAGTCCCTTTTTCCCCATaa
Downstream region at tRNA end position 
aatatcttgt
Secondary structure (Cloverleaf model)
>CHL090800198	Leu	TAA
                   T      ATaa aatatcttgt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T   T
                     A - T          T G
                    T     T T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       A A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGGTTCTAATAAAACCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=229 (in A-loop)
AATAAAAAATTTGAGCCTTCTAAAGGAAACTTTTTAAGTGGTTGCTTTCAAATTCAGGGAAACCTTAAGC
TACTCTTTGCTTGGCAATCCTGAGCCAAATCGTATAAGCTCTTTACTTATGCGAGAGGTGCAGAGACTCG
ACGGAAGCTATCCTAATGTCAATTTCAAGGATAAAGAGAGAGTCCGATCTTACAGGTATTTAAACTGCAA
CGAAAGTTGTTGTAAGATG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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